Research Areas - (169) Quantum Biology / Biosensing

Full path: Biology > Biophysics > Quantum Biology / Biosensing

Department(s)/lab(s): Genetics | Ting Lab @ Stanford
Summary:

Ting's lab invented proximity-dependent enzymatic labeling technologies (APEX, TurboID) that map the spatial proteome and transcriptome of living cells with organelle-level resolution, and develops genetically encoded fluorescent/voltage biosensors -- engineering biology's own molecular machinery into quantitative optical reporters.

Department(s)/lab(s): Chemistry | Tokmakoff Group @ UChicago
Summary:

Uses ultrafast multidimensional spectroscopy to study structural dynamics of biomolecules. Directions: (1) 2D IR spectroscopy of protein folding, water dynamics, and membrane systems with sub-100-fs time resolution; (2) single-molecule FRET for resolving conformational heterogeneity in proteins and nucleic acids; (3) development of ultrafast mid-IR laser sources and pulse shaping for 2D spectroscopy. Resolves dynamics inaccessible to other methods.

Department(s)/lab(s): Molecular and Cell Biology | Upadhyayula Lab @ UCB
Summary:

Upadhyayula (trained with Eric Betzig at Janelia) develops multifunctional adaptive-optical super-resolution microscopy and the large-scale computational pipelines needed to reconstruct terabyte- to petabyte-scale 3D subcellular dynamics datasets. The group is actively recruiting postdocs.

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Department(s)/lab(s): Molecular Biosciences | Reza Lab (Vafabakhsh) @ Northwestern
Summary:

Vafabakhsh uses single-molecule FRET to resolve the conformational dynamics of membrane receptors and channels -- including class C GPCRs, adhesion GPCRs, and potassium channels -- as they gate and signal, and applies related single-molecule methods to viral DNA packaging motors and synaptic protein complexes, aiming to build a quantitative, multi-scale picture of synaptic protein organization from the single-molecule to the synapse level.

Department(s)/lab(s): Physics and Astronomy | Vanderlinden Lab @ Edinburgh
Summary:

Willem Vanderlinden uses high-resolution biophysical tools to study protein-nucleic acid interactions. Research: (1) magnetic tweezers for pN-scale force and torque measurements on single DNA molecules and nucleoprotein complexes during retroviral integration, DNA supercoiling, and chromatin remodelling; (2) high-speed AFM imaging of nucleoprotein complexes and chromosomal organisation; (3) quantitative single-molecule statistical analysis of DNA topology. His approach provides cutting-edge spatial resolution to study chromatin biophysics and mobile DNA elements at the single-molecule level.

Department(s)/lab(s): Bioengineering | Vandsburger Lab @ UCB
Summary:

Vandsburger develops molecular and functional cardiac MRI methods, including CEST-based sensors, to noninvasively image myocardial metabolism, fibrosis, and remodeling with the specificity usually associated with molecular probes rather than conventional anatomical MRI. The lab is actively recruiting postdocs.

Department(s)/lab(s): Physics & Astronomy – Photon Science Institute | Waigh Group (Biophysics and Soft Matter) @ Manchester
Summary:

Waigh's group applies advanced optical and biophysical techniques to study complex biological fluids and single molecules. Research directions: (1) Microrheology β€” diffusing wave spectroscopy and optical trapping microrheology to measure viscoelastic properties of biopolymer networks and cytoplasm; (2) Antibody / protein dynamics β€” tracking single-molecule diffusion of antibodies and receptors in complex biological environments using fluorescence; (3) Non-linear flows of antibodies β€” studying anomalous diffusion and aggregation of therapeutic antibodies; (4) Neutron and X-ray scattering β€” structural characterization of complex biofluids at PSI facilities. Bridges soft matter physics and single-molecule biosensing.

Department(s)/lab(s): Electrical Engineering | Wang Lab (Spintronics/Biomagnetics) @ Stanford
Summary:

Wang develops giant-magnetoresistance (GMR) spin-valve biosensor chips that detect magnetic-nanoparticle-tagged biomolecules with high sensitivity and multiplexing for protein and nucleic-acid diagnostics -- a solid-state magnetic-sensing approach to biosensing that sits alongside NV-ensemble and OPM-based approaches at a very different sensitivity/format tradeoff.

Techniques:
Department(s)/lab(s): Bioengineering | Nucleic Acids Programming Lab (NAPL) @ UIUC
Summary:

Develops ultrasensitive, amplification-free nucleic-acid biosensors and molecular barcodes for high-resolution, multiplexed biosensing and diagnostics, alongside targeted drug/mRNA delivery platforms.

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Department(s)/lab(s): Imaging Physics | Mars Lab @ TU Delft
Summary:

WeingΓ€rtner's Magnetic Resonance Systems (Mars) Lab develops new MRI signal models and pulse sequences to non-invasively resolve the brain and heart microvasculature down to the capillary scale, using hydrogen nuclei as 'microscopic spies' on their surrounding tissue microstructure; the work is validated with in-vivo human studies (e.g., microvascular disease, cardiac imaging) and supported by an ERC Starting Grant. The lab is actively recruiting PhD students/postdocs to push quantitative MRI biomarkers into new disease areas.